Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEMALAQQVPNLGLARFSVQDKSILITGATGSLGRVAARALADAGARLTLAGGNSAGLAELVNGAGID---DAAVVTCRPDSLADAQ--QMVEAALGRYGRLDGVLVASG-SNHVAPITEMAVEDFDAVMDANVRGAWLVCRAAGRVLLEQGQGGSVVLVSSVRG--GLGNAAGYSAYCPSKAGTDLLAKTLAAEWGGHGIRVNALAP-TVFRSAVTEWMFTDDPKG-RATREAMLARIPLRRFAEPEDFVGALIYLLSDASSFYTGQVMYLDGGYTAC
1IY8 Chain:F ((10-266))----------------RFT--DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGL-EASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG-MVVNTASVGGIRGIGNQSGYAA---AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA


General information:
TITO was launched using:
RESULT:

Template: 1IY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164963 for 2137 contacts (-77.2/contact) +
2D Compatibility (PS) -26962 + (NN) -12262 + (LL) 1916
1D Compatibility (HY) -12000 + (ID) 4600
Total energy: -218871.0 ( -102.42 by residue)
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_1IY8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IY8-query.scw
PDB file : Tito_Scwrl_1IY8.pdb: