Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH
3G1L Chain:A ((42-232))
-------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATS-VEVAELWSTFMQKWIAYTAAVIDAERDRGAAPR------------------------TLPAHELATALNLMNERTLFASFAGEQP---SVPEARVLDTLVHIWVTSIY--
General information:
TITO was launched using:
RESULT:
Template:
3G1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127511 for 1383 contacts (-92.2/contact) +
2D Compatibility (PS) -20678 + (NN) -7737 + (LL) 2220
1D Compatibility (HY) 2400 + (ID) 1150
Total energy: -152456.0 ( -110.24 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3G1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1L-query.scw
PDB file :
Tito_Scwrl_3G1L.pdb
: