Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTRPREIYLATAVSIGILLSLIAPLGPPLARADGTSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA
4OJ7 Chain:A ((13-172))
----------------------------------DDTALTNLVALASQRLALAEPVAHWKWINRKPISDPPREAALLTDVEKRATANGVDPAYARTFFDDQIAASKQLQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSIANWKTLTRYDSAQKDALGTALSHVCA-----
General information:
TITO was launched using:
RESULT:
Template:
4OJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36500 for 1183 contacts (-30.9/contact) +
2D Compatibility (PS) -17456 + (NN) -11555 + (LL) 2916
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -72945.0 ( -61.66 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_4OJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OJ7-query.scw
PDB file :
Tito_Scwrl_4OJ7.pdb
: