Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQVHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVW-YQDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGLRP |
| 3WK9 Chain:A ((258-542)) | --------------------------GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF-------IPAN------PNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSL-FRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM------------------------VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWIPHLKRGH-IEDCGHWTQMDKPTEVNQILIKWL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193116 for 2421 contacts (-79.8/contact) +
2D Compatibility (PS) -29205 + (NN) -2859 + (LL) 3420
1D Compatibility (HY) -24400 + (ID) 5250
Total energy: -251410.0 ( -103.85 by residue)
QMean score : 0.387
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