Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQ---RTGVYANSKTIDWAVNDGLGSY----FWQHNWGSPKGYTHPAAHLHQV--EIDKRKVGGV--GVDVNQIL--KPQFGQWA---- |
| 1JFX Chain:A ((1-217)) | --------------------------------DTSGVQGIDVSHWQGSINWSSVKSAGMSFAYIKATEGTNYKDDRFSANYTNAYNAGI------IRGAYHFARPNASSGTAQADYFASNGGGWSRDNRTL--PGVLDIEHNPSGAMCYGLSTTQMRTWINDFHARYKARTTRDVVIYTTASWWNTCTGSWNGMAAKSPFWVAHWGVSAPTVPSGFPTWTFWQYSATGRVGGVSGDVDRNKFNGSAARLLALANNTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65973 for 1654 contacts (-39.9/contact) +
2D Compatibility (PS) -20469 + (NN) -1235 + (LL) 1744
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -87433.0 ( -52.86 by residue)
QMean score : 0.381
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