Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2XUL Chain:B ((1-112))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQT----GSEYTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI
General information:
TITO was launched using:
RESULT:
Template:
2XUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66270 for 704 contacts (-94.1/contact) +
2D Compatibility (PS) -11895 + (NN) -3200 + (LL) 488
1D Compatibility (HY) -13200 + (ID) 3250
Total energy: -97327.0 ( -138.25 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_2XUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XUL-query.scw
PDB file :
Tito_Scwrl_2XUL.pdb
: