Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTF-PFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADL-GYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
2EUG Chain:A ((25-220))
-----------------------------QTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAI-PPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDW---
General information:
TITO was launched using:
RESULT:
Template:
2EUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92589 for 1539 contacts (-60.2/contact) +
2D Compatibility (PS) -21679 + (NN) -18268 + (LL) 2832
1D Compatibility (HY) -17200 + (ID) 4050
Total energy: -150954.0 ( -98.09 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2EUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EUG-query.scw
PDB file :
Tito_Scwrl_2EUG.pdb
: