Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTSIPTFPFDRPVPTEPSPMLSELRNSCPVAPIELPSGHTAWLVTRFDDVKGVLSDKRFSCRAAAHPSSPPFVPFVQLCPSLLSIDGPQHTAARRLLAQGLNPGFIARMRPVVQQIVDNALDDLAAAEPPVDFQEIVSVPIGEQLMAKLLGVEPKTVHELAAHVDAAMSVCEI-GDEEVSRRWSALCTMVIDILHRKLAEPGDDLLSTIAQANRQQSTMTDEQVVGMLLTVVIGGVDTPIAVITNGLASLLHHRDQYERLVEDPGRVARAVEEIVRFNPATEIEHLRVVTEDVVIAGTALSAGSPAFTSITSANRDSDQFLDPDEFDVERNPNEHIAFGYGPHACPASAYSRMCLTTFFTSLTQRFPQ-LQLARPFEDLERRGKGLHSVGIKELLVTWPT |
| 4MM0 Chain:A ((8-399)) | ---ATRHPYPFDRAVPTAIPPLYEELRETERVAAITMATGDPGFLVTRYEDVRFVLSDPRFSVRQD-LPGAPRL--TEMTFESVMTTDPPVHTRLRRLLSRDFTARRIERMRPRLEEIAEGLLDEMEKKGAPADIVESLAVPFPITVICELLGVPMVDVARFRGWADTMVSL-TGYSMEDWTAARDALESYLDGLVAAKRENPGSDLLSALVATAAEDNELTDHDVRSLSLILLLAGYEPASNQLGSSVLTLLRFPDRLAELRRDPGLLPSAVEELMRYAPAGDGALFRVTLEDVTIGDTHIPANSAVLASTQAANWDPRRFDDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRRF-PRLALATDESGLRWSSPGSMLSGFAEIPVTW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260224 for 3254 contacts (-80.0/contact) +
2D Compatibility (PS) -41740 + (NN) -26356 + (LL) 256
1D Compatibility (HY) -24400 + (ID) 6450
Total energy: -358914.0 ( -110.30 by residue)
QMean score : 0.521
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