Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGYPVIVEATRSPIGKRNGWLSGLHATELLGAVQKAVVDKAGIQSGLHAGDVEQVIGGCVTQFGEQSNNISRVAWLTAGLPEHVGATTVDCQCGSGQQANHLIAGLIAAGAIDVGIACGIEAMSRVGLGAN----------AGPDRSLIRAQSWDIDLPNQFE---AAERIAKRRGITREDVDVFGLESQRRAQRAWAEGRFDREISPIQAPVLDEQNQPTGERRLVFRDQGLRE-TTMAGLGELKPVLEG-GIHTAGTSSQISDGAAAVLWMDEAVARAHGLTPRARIVAQALVGAEPYYHLDGPVQSTAKVLEKAGMKIGDIDIVEINEAFASVVLSWARVHEPDMDRVNVNGGAIALGHPVGCTGSRLITTALHELERTDQSLALITMCAGGALSTGTIIERI |
| 4XL2 Chain:A ((1-391)) | MKEVVIASAVRTAIGSYGKSLKDVPAVDLGATAIKEAVKKAGIKPE----DVNEVILGNVLQAG-LGQNPARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQIIKAGDADVIIAGGMENMSRAPYLANNARWGYRMGNAKFVDEMITDGLWD--AFNDYHMGITAENIAERWNISREEQDEFALASQKKAEEAIKSGQFKDEIVPV---VIKGRKGET----VVDTDEHPRFGSTIEGLAKLKPAFKKDGTVTAGNASGLNDCAAVLVIMSAEKAKELGVKPLAKIVSYGSA---------GPFYATKAAIEKAGWTVDELDLIESNEAFAAQSLAVAKDLKFDMNKVNVNGGAIALGHPIGASGARILVTLVHAMQKRDAKKGLATLCIGGGQGTAILLEK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189972 for 3547 contacts (-53.6/contact) +
2D Compatibility (PS) -39908 + (NN) -19046 + (LL) 1148
1D Compatibility (HY) -17600 + (ID) 7400
Total energy: -272778.0 ( -76.90 by residue)
QMean score : 0.440
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