Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MRKSLV-ALLLLAASGLAQAQVDLREGHPDRYTV-VRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYVDGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYARGKFADGQPAYGIFRQGKVYIDPKT-----KEVLGINADDIGGGEVVATEGDVA-TLALTRTTQEVRLGDRLFPTEERAVNSTFMPGEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKLSYALVLMASRPLSVTDRVQNP |
| 2YN5 Chain:A ((1-283)) | TPPNAPVVTYSDIVNDLIIMQGTAEAKSQLIITDSEGNTYTLTVPDNGKWSMAIPYP-----------------------SEGKFTITSVD-------AIGNRSDDVPLD-------IMKEVPVISLSPDSD----SGTVGDNITRDKQPTFIIGNLESDVVVVQVDINGTVYNAEKNA------DGVWFFTPGTPLADGSYTISVIASDAAGNQKNSLPITVTIDSTLTVPEIALAAGEDNGASDSDNVTNHTQPKFTLQHIDADVTGVTVNVTHNGVTDIYQATQGADG--------WTFTPPAAWNDGNYTLSVTVVD-RAG-------NSQQS------ASLAVTVDS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16918 for 1905 contacts (8.9/contact) +
2D Compatibility (PS) -27376 + (NN) 1735 + (LL) 5840
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -12433.0 ( -6.53 by residue)
QMean score : 0.162
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