Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRYCVFGNPIGHSKSPLIHR----LFAEQTGEALVYDAQLAPLDDFPGFARRFFEQG-KGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLGAVHGCGFAEVEGPFDLIVNGTSASLAGDVP---PLAQSVIEPGRTVCYDMMYAKEPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV |
4FOS Chain:A ((3-260)) | LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLES--HIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLV-LENDELVGYNTDALGFYLSLKQK-----NYQNALILGAGGSAKA-LACELKKQGLQVSVLNRSSR-GLDFFQR---LGC--DCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKEGK-LAYDLAYG-FLTPFLSLAKELKTPFQ-DGKDMLIYAAALSFEKFSASQIPYSKAFEVMRSVF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120453 for 2194 contacts (-54.9/contact) +
2D Compatibility (PS) -26488 + (NN) -7624 + (LL) 1916
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -175599.0 ( -80.04 by residue)
QMean score : 0.380
|
|
|