Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRR-QTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSE--GEFD-PRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAW----PAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG |
| 3ISP Chain:A ((5-290)) | ----QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVRE-KPCRATTAGIPLLRLAAQTALLESEALAEMG-ASLKRTRITIAVNADSMATWFSAVFDG----LGDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVP-GCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAIT-----RPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCD--IHLDVPLYWQCWKLDSPIIARITDTVRAAASG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112006 for 2130 contacts (-52.6/contact) +
2D Compatibility (PS) -29369 + (NN) -8163 + (LL) 1664
1D Compatibility (HY) -5200 + (ID) 3200
Total energy: -156274.0 ( -73.37 by residue)
QMean score : 0.394
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