Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSLKGMAIFATVVDKGSMAAAAQSLGMTPSAVSQQIRKLESRAQVTLLHRTTRRLTLTEAGEAFYRSCAQMLAIAEEAERRLGEWRDAPVGELRLAAP-V-GFSGTLITQALKPLLENHRQLRLQLFFQDERIDLVAERIDLAIRVGNLADSSLVARHLGDWSSVLCAAPAYLRQRAPINRPEQLTEVDWISLNTSNHLNHLTLSGPGGEVCKLRLEPRVAANGMLAVRQFTLDGLGVSYQPLPEVRDALNDGRLQQLLPEWRIPG-LGIYAVTPRREAQPAKVKVAIEALRRAFATDGDERWS |
| 3HHF Chain:A ((5-207)) | -----------------------------------------------------------------------------------------PQGVLSVDSAMPMVLHL--LAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGN--PYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123884 for 1532 contacts (-80.9/contact) +
2D Compatibility (PS) -20986 + (NN) -8119 + (LL) 8844
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: -159345.0 ( -104.01 by residue)
QMean score : 0.463
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