Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGRPQAVPTVQVDNAEVIVT-EWRFAPGAETGRHR-HGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAH--EVVFVETEIK
2VPV Chain:A ((73-166))
---ENFALEIMFDKHKEYFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV--CKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQVTVS
General information:
TITO was launched using:
RESULT:
Template:
2VPV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29813 for 566 contacts (-52.7/contact) +
2D Compatibility (PS) -9931 + (NN) -754 + (LL) -28
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -45876.0 ( -81.05 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_2VPV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VPV-query.scw
PDB file :
Tito_Scwrl_2VPV.pdb
: