Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNADWMQRDLNVLWHPCTQMKDHERLPVIPIRRGEGVWL---EDFEGKRYIDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHQPVIELSERLVKITPPGLDRVFYADSGSAGIEVALKMSYHFWLNSGRPRKKRFVTLTNSYHGETIAAMSVGDV-----ALFTETYKSLLLDTIKVPSPDCFLRPDGMCWEEHSRNMFAHMERTLAEGHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIAPDFLCLSKALTGGYLPMSAVLTSETIYRGFYDDYQTLRAFLHSHTYTGNPLACAAALATLDIFE----EDKVIEANRALSTHMARATAHLADHPHVAEVRQTGMVLAIEMVQ--DKASRTPYPWQERRGLKVFQHGLERGALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIATRDAVSVAVSDFHPDHRDPG |
| 4MQR Chain:B ((41-450)) | --------------LWHPYSSIG-REAVSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAP-QVP-------------RDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTI--SAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARA----LPAVTDVRVCGAIGVIECDRPVDLAVATPA-------------ALDRGVWLRPFRNLVYAMPPYICTPAEI---TQITSAMVEVARLVGS--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270461 for 3414 contacts (-79.2/contact) +
2D Compatibility (PS) -42151 + (NN) -10776 + (LL) 3676
1D Compatibility (HY) -35200 + (ID) 8000
Total energy: -362912.0 ( -106.30 by residue)
QMean score : 0.516
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