Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELILLHNPRCSKSRAALELLEARGLQPQVVRYLETPPSAAELKAILAKLGIPARQLLRTGEDEYKALGLDEPSLGEEAIIEAMARHPKLIERPVLVAGDKAVVGRPPERVLEILA---
1Z3E Chain:A ((1-119))
-HMVTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRKV
General information:
TITO was launched using:
RESULT:
Template:
1Z3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65409 for 802 contacts (-81.6/contact) +
2D Compatibility (PS) -12851 + (NN) -6572 + (LL) 208
1D Compatibility (HY) -8800 + (ID) 1200
Total energy: -94624.0 ( -117.99 by residue)
QMean score : 0.730
(partial model without unconserved sides chains):
PDB file :
Tito_1Z3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z3E-query.scw
PDB file :
Tito_Scwrl_1Z3E.pdb
: