Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRFEIAFSGQLVAGARPEVVKANLAKLFQADAQRIELLFSGRRVVIKNNLD--AASAEKYRSVLERAGAIAVVAEMEVEEVVMAPPPAQTTPVEAPQTRAATGTSAPAGRLQVAPRDGYMAAFAEVDAPDFGLAPVGADLQDAKAEAEAPKLDLSRFSVAPVGSDMGQARSEPAAPAPDTSHLRLQD |
3GHF Chain:A ((25-77)) | ---------------AEPEVIRQALEDKIAQ----APAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLPLLTEGKEK--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15709 for 262 contacts (-60.0/contact) +
2D Compatibility (PS) -5514 + (NN) -2840 + (LL) 7300
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -20013.0 ( -76.39 by residue)
QMean score : 0.658
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