Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSIKKNLGLLAMTAALAACASNPNDLPDFPEHEYAATQQVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLD-AAKRDPDVQPPVLDPRRATYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLTR
3QEC Chain:A ((6-150))
-------------------------DLPDFPEHEYAATQQVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAK-FGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLTR
General information:
TITO was launched using:
RESULT:
Template:
3QEC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26955 for 1016 contacts (-26.5/contact) +
2D Compatibility (PS) -15526 + (NN) -9837 + (LL) 2124
1D Compatibility (HY) -14400 + (ID) 7000
Total energy: -71594.0 ( -70.47 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3QEC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QEC-query.scw
PDB file :
Tito_Scwrl_3QEC.pdb
: