Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MSRIDTPPGFAVYPSASPKAANLPAVDQVLAFEQALGGEP---PAAGRRLAGLENGALGERLLQRFAQPLQGLEADRLELKAMLRAELPLGRQQQTFLLQLLGAVEHAPGGEYLAQLARRELQVLIPLNGMLDNLVRNSHKLDLES----
1RW2 Chain:A ((1-152))
MHHHHHHKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEE-----QRFNNFLKALQEKVEIKQLNHFWEIVVQDGI-TLITKEEASGSSVTAEEAKKFLAPKDK
General information:
TITO was launched using:
RESULT:
Template:
1RW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8543 for 911 contacts (-9.4/contact) +
2D Compatibility (PS) -14676 + (NN) -8472 + (LL) 264
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -35227.0 ( -38.67 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_1RW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RW2-query.scw
PDB file :
Tito_Scwrl_1RW2.pdb
: