Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIAT-LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL---------------------------------------------------------------------------------------------------------- |
| 1Y8A Chain:A ((20-332)) | QGHMFFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGY----EAGYTLKLLTPFLAAAGVKNRDVERIAELSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR----------GELHGTEVDFDSIAVPEGLREELLSIIDVIAS----LSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHADVVIISPTAMSEAKVIELFMERKERAFEVLSAVSIPETEIYIMENSDFGEVLEKSKRMRVRLRGLAGELGGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75520 for 1346 contacts (-56.1/contact) +
2D Compatibility (PS) -19615 + (NN) -4751 + (LL) 932
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -104554.0 ( -77.68 by residue)
QMean score : 0.316
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