Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAAKAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKVL--GRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR
1E6W Chain:D ((7-258))
--VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENPFLNGEVIRLDGAIRM---
General information:
TITO was launched using:
RESULT:
Template:
1E6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138864 for 2149 contacts (-64.6/contact) +
2D Compatibility (PS) -27432 + (NN) -11244 + (LL) 696
1D Compatibility (HY) -26000 + (ID) 7050
Total energy: -209894.0 ( -97.67 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1E6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E6W-query.scw
PDB file :
Tito_Scwrl_1E6W.pdb
: