Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDYATTAAGFDLQRTAAATLSGTLQALNACVECCDRHAL------P-GRIALFWEGKDGSRASYTFSELKALSGRFANFLQ-AQGVRPGDCVAGLLPRTPELLVTILGAWRLGAVYQPLFTAFGPKAIEHRVATAGSKVLVTDAANRDKLDE----LADPPLAVTVGGPKGQGIRRGDFSFWAELERYPAEFEPVPRSGEDPFLMMFTSGTTGLAKPVPVPLKAILAFVGYLREAVDLRPEDAFWNLADPGWAYGLYYAVAGPLAMGHPTTFY-EGPFSVESTCRIIRDYGITNLAGSPTAYRLLMAAGAAAETALKGRLRAVSSAGEPLTPEVIRWFADRLGTTIHDHYGQTELGMVLCNHHALAHPVRVGAAGFACPGHRVVVLDDDLNELPPGQPGILALDRRRS--PLMWFPGYQGLET---AAFVGDYYLSGDTVELNEDGSISFVGRADDVITTSGYRVGPFDVESALIEHPAVMEAAVIGKPDPERTELVKAFVVLCAGHR--PTPELADALQRYVRQRLSAHAYPREIEFLEELPKTPSGKIQRFLLRNQEIARQREAAPRAAAAN |
| 3C5E Chain:A ((35-562)) | -------------------------AKFNFASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEK----SCDGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLS--SYKFPHLQNCVTVGESLLPETLENWRAQTGLDIRESYGQTETGLTCMVSKTM--KIKPGYMGTAASCYDVQIIDDKGNVLPPGTEGDIGIRVKPIRPI-GIFSGYVDNPDKTAANIRGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPVRGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335199 for 4413 contacts (-76.0/contact) +
2D Compatibility (PS) -54632 + (NN) -19636 + (LL) 3500
1D Compatibility (HY) -29200 + (ID) 8250
Total energy: -443417.0 ( -100.48 by residue)
QMean score : 0.519
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