Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA
3USS Chain:A ((3-198))
--SILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKE---
General information:
TITO was launched using:
RESULT:
Template:
3USS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96354 for 1478 contacts (-65.2/contact) +
2D Compatibility (PS) -21662 + (NN) -19123 + (LL) 104
1D Compatibility (HY) -24800 + (ID) 9800
Total energy: -171635.0 ( -116.13 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3USS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3USS-query.scw
PDB file :
Tito_Scwrl_3USS.pdb
: