Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEKAEKITTVQEAIDYIVAHQQ
4KEH Chain:D ((1-76))
-STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ-
General information:
TITO was launched using:
RESULT:
Template:
4KEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38579 for 505 contacts (-76.4/contact) +
2D Compatibility (PS) -8051 + (NN) -748 + (LL) 328
1D Compatibility (HY) -8800 + (ID) 3350
Total energy: -59200.0 ( -117.23 by residue)
QMean score : 0.689
(partial model without unconserved sides chains):
PDB file :
Tito_4KEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KEH-query.scw
PDB file :
Tito_Scwrl_4KEH.pdb
: