Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIKRGLDLPISGAPEQRIEAARPVRSVALIGFDYHGMKPTMAVQVGDRVKLGQVLFTDKKNPSVSYTAPGAGVVSAIHRGEKRVLQSVVIDLDGDEQLEFARYPADKLATLSAEQVRDNLLQSGLWTALRTRPFSKVPDPESSPSSIFVTAIDTQPLAADPQVVIAEQGE-AFQAGLTVLGRLARVFLCKAEGVSLPGEALSGVTA-QAFSGPHPAGLPGTHIHFLDPVGAGKSVWNLNYQDVIAIGKLFTTGQLWTERVIALAGPVVEKPRLVRTRLGANLDELAA-GQLQPGNNRLISGSVLGGRTAHGAYAYLGRYHLQLSCLKE---GDQREFLHYLRAGVEKHSLLNVFVSRLLGGKRFAFTTSTNGSPRAMVPVGNYEAVMPLDILPTQLLRYLIVGD-T-EMAQKLGALELDEEDLA-LCSYVCAGKYEYGPILRDNLARIEQEG |
| 3HIC Chain:A ((2-311)) | -----------------------SLIYTITL------------NPAIDRLLFIRGELEKRKTNRVIKTEFDCGG---------KGLHVSGVLSKFGIKNEAL-----GIAGSDNLDKLYAILKEKHI-----NHDFLVEAGTS--------TRECFVVLSDDT-----NGSTMIPEAGFTVSQTNKDNLLKQIAKKVKKE-------DMVVIAGSPPPHYT-----------------LSDFKELLRTVKA-------------------TGAFLGCDNSGEYLNLAVEMGV-----------------------DFIKPNEDEVIAILDEKTNSLEENIRTLAEKIP-----YLVVSLGAKGSICAHNGKLYQVIPPKVQERN-----DTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQ-----QFDLEAAGKLKNQVSIIQLEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 268 for 2493 contacts (0.1/contact) +
2D Compatibility (PS) -31464 + (NN) -4656 + (LL) 9912
1D Compatibility (HY) -400 + (ID) 1950
Total energy: -28290.0 ( -11.35 by residue)
QMean score : 0.265
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