Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
1B9L Chain:A ((2-120))
----AQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADKARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDKLHALRYADSVSMTLSWQR
General information:
TITO was launched using:
RESULT:
Template:
1B9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82213 for 809 contacts (-101.6/contact) +
2D Compatibility (PS) -12792 + (NN) -377 + (LL) 344
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -110738.0 ( -136.88 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1B9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B9L-query.scw
PDB file :
Tito_Scwrl_1B9L.pdb
: