Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPT-SWPNLMRDFADDR-FDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDN-----VTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQQPFDFAEKAYLLP--RDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4P0G Chain:A ((7-435)) | -------------------------APTALERVQKEGVLRVITRNS--PATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTY-LDVTPQIIYRNGQQRPTRPEDL--VGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGL--AWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYY------GHVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124194 for 1857 contacts (-66.9/contact) +
2D Compatibility (PS) -25266 + (NN) -12688 + (LL) 3640
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -167558.0 ( -90.23 by residue)
QMean score : 0.461
|
|
|