Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSRSVNPRPSFAPRALSLAIAL-----LLGAPAFAANSGEAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFMGQAVAATDTIETDTLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLREDSGQWQDTNIEALNWSFETTLLNAHAGVAQRFSEYRTDLDELAPEDKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTV--DDRRIATGKQSGDVNAFG---VDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLREDYDASLVYHKFWRVDDDSDIGTSGINA-------ALQPGEKDIGQELDLVVTKYFKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF |
| 4CI0 Chain:A ((2-386)) | --SERIVISPTSRQEGHAELVMEVDDEGIVTKGRYFSITPVR-----GLEKMVTG-----KAPETAPVMVQRICGVC---------------PIPHTLASVEAIDDSL--------------DIEVPKAGRLLRELTLAAHHVNSHAIHHFLIAPDFVPENLMADAINSVSEIRKNAQY-VVDMVAGEGIHPSDVR----------------IGGMADN-------ITELARKRLYARLKQLKPKVNEHVELMIGLIEDKGLPEGLGVHNQPTLASHQIYGDRTKFDLDRFTEIMPESWYDDPEIAKRACS-TIPLYDGRNVEVGPRARMVEFQGF------------------------KERGVVAQHVARALEMKTALSRAIEILD--ELDTSAPVRADFDER----------GTGKLGIGAIEAPRGLDVHMAKVENGKIQFYSALVPTTWNIPTMGPATEGFHHEYGPHVIRA----------YDPCLSCATH---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9434 for 3285 contacts (2.9/contact) +
2D Compatibility (PS) -38030 + (NN) -385 + (LL) 4536
1D Compatibility (HY) -6000 + (ID) 3350
Total energy: -33795.0 ( -10.29 by residue)
QMean score : 0.251
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