Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALG--GAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSA--DPLRQLARYI-VERRN |
3M9U Chain:A ((8-301)) | -LIAFEDQWVPALNAPLKQAILADSQDAQ-LAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQ---ALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAG-LILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSS------------DEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTERVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120152 for 2294 contacts (-52.4/contact) +
2D Compatibility (PS) -30845 + (NN) -28267 + (LL) 1312
1D Compatibility (HY) -22400 + (ID) 6200
Total energy: -206552.0 ( -90.04 by residue)
QMean score : 0.567
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