Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIESGID---SDETLAAAVGSD------AERIHRLMRLLVAFEIFQGDTR--DGYANTPTSHLL--RDVEGSFRDMVLFYG-EEFHAAWTPACEALLSGTP-GFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEIPRL--LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMA---GDGRVVVIERTI----SASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA |
| 1FP2 Chain:A ((8-352)) | RKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHG-KPISLSNLVSIL---QVPSSKIGNVRRLMRYLAHNGFFEIITKEEESYALTVASELLVRGSD-LCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGS-------NNLTYVGGDMFTSIPN-ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMA-CLNGKERNEEEWKKLFIEAGFQHYKISPLTG-FLSLIEIYP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181487 for 2378 contacts (-76.3/contact) +
2D Compatibility (PS) -34311 + (NN) -14207 + (LL) 428
1D Compatibility (HY) -25200 + (ID) 3900
Total energy: -258677.0 ( -108.78 by residue)
QMean score : 0.463
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