Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMATLFDPIVLGDLELPNRIVMAPLTRCRADE-GRVPNALMAEYYAQRADAGLILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRIS-DPLYLNGELPVAPSAIAAEGHVSLVRPKRPYV-----TPRALDTEEIADIVEAYRQGAERAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMGDSNRLETFS-HVARELGKRGIAFICAREAQA------DDSIGVALKKAFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPETFYTGGTEGYLDYPTLA
1VYP Chain:X ((5-364))---LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLFHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKAELNPQRPESFYGGGAEGYTDYPSL-


General information:
TITO was launched using:
RESULT:

Template: 1VYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -168754 for 3000 contacts (-56.3/contact) +
2D Compatibility (PS) -38104 + (NN) -25212 + (LL) 548
1D Compatibility (HY) -26000 + (ID) 8200
Total energy: -265722.0 ( -88.57 by residue)
QMean score : 0.622

(partial model without unconserved sides chains):
PDB file : Tito_1VYP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VYP-query.scw
PDB file : Tito_Scwrl_1VYP.pdb: