Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDTGRRILLNCDMGESFGAWRMGDDVHSMPLVDQANLACGFHA-GDPLTMRRAVELAVRHGVSIGAHP-----AYPDLSGFGRR--SLACSAEEVHAMVLYQIGALDAFCRSLGTQVAYVKPHGALYNDLVGDDELLRAVLDACAAYRKGLPLMVLALADNGRELELADEADVPLLFEAFADRAYLPDGRLAPRRLGGAVHHDPQRIIEQALAIARGEAFPDYDGNPLRLTADSLCVHGDNPQSLAVLRRLRAALDSL |
| 2NLY Chain:A ((17-159)) | --------------------------VKGVDDFLTGEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPK---------PSGITSNLSVGEVKSRVRKAFDDIPYAV---GL-----NNH--MGSKIVENEKIMRAILEVVKEK--NAFIIDSGTSPHSLIPQLAEELEVPYAT-RSIF---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93400 for 929 contacts (-100.5/contact) +
2D Compatibility (PS) -13916 + (NN) -3936 + (LL) 6488
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -108964.0 ( -117.29 by residue)
QMean score : 0.204
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