Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGADAGELAGLGRIGVPLSGDLGKVCEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSADEKLLLAEAAKDIPIVFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFATVRAGDVVGDHTVLFAAEGERVEITHKASSRMTFARGAVRAALWLEGKENGLYDMQDVLGLR
1DIH Chain:A ((5-271))
NIRVAIAGAGGRMGRQLIQAALALEG-VQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLN
General information:
TITO was launched using:
RESULT:
Template:
1DIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186673 for 2184 contacts (-85.5/contact) +
2D Compatibility (PS) -29068 + (NN) -12655 + (LL) 144
1D Compatibility (HY) -24800 + (ID) 8350
Total energy: -261402.0 ( -119.69 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1DIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DIH-query.scw
PDB file :
Tito_Scwrl_1DIH.pdb
: