Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISLERKGHAPTLLYERGIAERFREAIIRRYFSRGYLLDPFCLAVEEGLPEGFYTLGEIAPDDFFQSAYYQTYYLGAGAVEDVYYILDLGPTEKLSICLYNGLSASRYSDAQVAALAGLAPPVLELARQFCAGRADLSPNPQADLAPRLQEVLRGFGRGVLTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKLEVGSQSELFALFIECLSQGQRVGP |
1YIO Chain:A ((140-200)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------FSSLTGREQQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIMQKLNVRSLANLVHLVEKY--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23077 for 390 contacts (-59.2/contact) +
2D Compatibility (PS) -6681 + (NN) -2723 + (LL) 10668
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -28013.0 ( -71.83 by residue)
QMean score : 0.739
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