Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGR--SEERLGPLLR-GQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--EGDCAMVTYNLNERA-ERPVIEYAAAHAKGILVKKALASGHACLG----------------------------------------AGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA |
| 1PYF Chain:A ((2-300)) | -------KK-AKLGKSDLQVFPIGLGTNAVGGHNL------YPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT---PKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118271 for 2105 contacts (-56.2/contact) +
2D Compatibility (PS) -27419 + (NN) -10980 + (LL) 1064
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -170856.0 ( -81.17 by residue)
QMean score : 0.525
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