Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
| 3IFC Chain:B ((11-325)) | ---LTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGIAG-------QVKKLDVLSNSLVINMLQSSYSTCVLVSEE-NKDAIITAKEKRGKYVVCFDPLDGSSNIDCLASIGTIFAIYRKTS------DEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQGVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDG--SAPYGARYVGSMVADVHRTLVYGGIFLYPANQKSPK--GKLRLLYECNPVAYIIEQAGGLATTGTQPVLDVKPEAIHQRVPLILGSPEDVQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178390 for 2642 contacts (-67.5/contact) +
2D Compatibility (PS) -33537 + (NN) -20093 + (LL) 1668
1D Compatibility (HY) -26400 + (ID) 6500
Total energy: -263252.0 ( -99.64 by residue)
QMean score : 0.510
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