Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFNMHNRNLLSLMHHSTRELRYLLDLSRDLK-RAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLADI |
1EP9 Chain:A ((3-311)) | ---QLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHYSS-LKGLTLSWIGDG-NNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEK-KKRLQAFQGYQVTMKTAKVAASDWT-FLHCLP---------------RKPE-----EVDDEVFYSPRSLVFPEAENRKWTIMAVMVSLLTD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153577 for 2698 contacts (-56.9/contact) +
2D Compatibility (PS) -33449 + (NN) -13753 + (LL) 2228
1D Compatibility (HY) -21200 + (ID) 6300
Total energy: -226051.0 ( -83.78 by residue)
QMean score : 0.719
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