Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQATCARIARRFVWRNRMPRRLFIGLFLLPLPLFAAPPKDELAYAVGARLGMRLQQEMPGLELSELLLGLRQAYRGEALEIPPERIEQLLLQHENATTETPRTTPAEARFLANEKARFGVRELT--GGVLVSELRRG---QGNGIGAATQVHVRYRGLL-ADGQVFDQSESAE---WFALD--SVIEGWRTALRAMPVGARWRVVIPSAQAYGHEGAGDLIPPDAPLVFEIDLLGFR
4QT3 Chain:A ((7-122))
--------------------------------------------------------------------------------------------------------------------------ELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFR
General information:
TITO was launched using:
RESULT:
Template:
4QT3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84374 for 763 contacts (-110.6/contact) +
2D Compatibility (PS) -11583 + (NN) -4641 + (LL) 10372
1D Compatibility (HY) -8800 + (ID) 2200
Total energy: -101226.0 ( -132.67 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4QT3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QT3-query.scw
PDB file :
Tito_Scwrl_4QT3.pdb
: