Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQA-DALGDSLEQAHIRKATFAAPAWEGYTNADGSGLYWDLLKQVY----APYGLDVKFINMPWNRANKLMTAGSMVDGVPGEIPGVEGKLYAQLPIDIE----YHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHL-PADAYPIAQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ--- |
| 4CIJ Chain:A ((3-269)) | ----MSGLKPCVDWLQVTFKTGQDSVKKCVEKLEKVFEILGLNEAEFLPLKNGKYGYKQGVAFQGNPVLAVYYDGADDMGIHVEM-TGQGCRLFELHTSINWYELFYRLVYEYEVNIT-RLDVAVDDFKGYFKINTLVKKLKDDE--VTSRFKKARHIENIVIEGGETIGHTLYFGAPSSDIQVRFYEKNVQMGMDIDVW-NRTEIQLRDDRAHVVAQIIADDV--LPLGEIVAG-LLRNYIQFRTRKATDKNKKRWPLARFWLNFLGDVQPLRIAKQM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32445 for 1872 contacts (-17.3/contact) +
2D Compatibility (PS) -25624 + (NN) 8120 + (LL) 1348
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -62951.0 ( -33.63 by residue)
QMean score : 0.129
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