Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPNSTGEVPSPIPKGALGLSLALASLIITANLLLALGIAWDRRLRSPPAGCFFLSLLLAGLLTGLALPTLPGLWNQSRRGYWS-----CLLVYLAPNFSFLSLLANLLLVHGERYMAVLRPL-----QPPGSIRLALLLTWAGPLLFASLPAL-GWNH-----------------WTPGANCSSQAIFPAPYLYLEVYGLLLPAVGAAAFLSVRVLATAHRQLQDICRLERAVCRDEPSALARALTW---RQARAQAGAMLLFGLCWGPYVATLLLSVLAYEQRPPLGPGT-----LLSLLSLGSASAAAVPVAMGLGDQRYTAPWRAAAQRCLQGLWGRASRDSPGPSIAYHPSSQSSVDLDLN---------------------------------------------------------------------------------------- |
| 2RH1 Chain:A ((36-477)) | ---------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQT-VTNYFITSLACADLVMGLAV--VPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153008 for 2207 contacts (-69.3/contact) +
2D Compatibility (PS) -33509 + (NN) -12347 + (LL) -40
1D Compatibility (HY) -10800 + (ID) 2350
Total energy: -212054.0 ( -96.08 by residue)
QMean score : 0.158
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