Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNT-------TSVTEFLLLGVTDIQELQPFLFVVFLTIYFISVTGNGAVLMIVISDPRLHSLMYFFLGNLSYLDICYS---TVTLPKMLQNFLSTHKAISF------LGCISQLHFFHSLGSTESMLF------------------AVMAFDLSVAICKPLRYTVIMNPQLCTQMAITIW-----VIGFFHALLHSVMTSRLNFCGSNRIHHFLCDIKPLLKLACGNTELNQWLLSTVTGTIAMGPFFLTLLSYFYIITYLFFKTRSCSMLCKALSTCASHFMVVILFYAPVLFTYIHPALESFMDQDRIVAIMYTVVTPVLNPLIYTLRNKEVKGALGRVIRRL--------------- |
| 1Q0O Chain:A ((4-359)) | EIPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLG--LHVSYEDENQIYLRSFEEFIHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLEDLGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGNGPRLHHVAFSTHEKHNIIQICDKMGA-LRISDRIERGPGRHGVSNAFYLYILDPDNH-RIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGNPVVPSWYTEASKVLDLDGNVQEIIERTDDSELEVTI-GADGFSFTRAGDEDGSYHGQASKGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -353912 for 2543 contacts (-139.2/contact) +
2D Compatibility (PS) -31326 + (NN) 9668 + (LL) 540
1D Compatibility (HY) 4800 + (ID) 1800
Total energy: -372030.0 ( -146.30 by residue)
QMean score : 0.179
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