Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------MANVTLVTGFLLMGFSNIQKLRILYGVLFLLIYLAALMSNLLIITL--------------ITLDVKLQTP-----MYFFLKNLSFLD-------VFLVSVPIPKF-------IVNNL-----THNNSISILGCAFQLLLMT--------SFSAGEIFILTAMS-YDRYVAICCPL-----NYEVIMNTGVCVLMASVSWAIGGLFGTAYTAGTFSMPFCGSSVIPQFFCDVPSLLRISCSETLMVIYAGIGVGACLSISCFICIVISYIYIFSTVLKIPTTKGQSKAFS-----TCFPHLTVFTVFIITAYFVYLKPPSNSPSVIDRLLSVIYTVMPP-------VFNPVTYSLRNNDMKCALIRLLQKTYGQEAYFI---------------------------- |
| 4XGC Chain:D ((5-457)) | DRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQS--GALYFSRNHFDPGEYGF-SPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAY-LKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -311876 for 2032 contacts (-153.5/contact) +
2D Compatibility (PS) -31336 + (NN) 3111 + (LL) 376
1D Compatibility (HY) -19200 + (ID) 2450
Total energy: -361375.0 ( -177.84 by residue)
QMean score : 0.088
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