Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MPNSTTVMEFLLMRFSDVWTLQILHSASFFMLYLVTLMGNILIVTVTTCDSSLHMPMYFFLRNLSILDACYISVTVPTSCVNSLLDSTTISKAGCVAQVFLVVFFVYVELLFLTIMAHDRYVAVCQPLHYPVIVNSRICIQMTLASLLSGLVYAGMHTGSTFQLPFCRSNVIHQFFCDIPSLLKLSCSDTFSNEVMIVVSALGVGGGCFIFIIRSYIHIFSTVLGFPRGADRTKAFSTCIPHILVVSVFLSSCSSVYLRPPAIPAATQDLILSGFYSIMPPLFNPIIYSLRNKQIK--VAIKKIMKRIFYSENV----- |
| 1HBN Chain:C ((1-247)) | AQYYPGTTKVAQNRRNFCNPEYELEKLREIS--DEDVVKILGH-------------RAPGEEYPSVHPPLEE----MDEPEDAIREMVEPIDGAKAGDR-----VRYIQFTDSM---------YFAPAQPYVRSRAYLCRYR-----------GADAGTLSGR---------QIIETRERDLEKISKELLETEFFD-----PARSGVRG--------------KSVHGHSLRLDEDGMMFDMLRRQIYNK---DTGRVEMVKNQIGDELDEPVDLGEPLDEETLMEKTTIYRVDGEAYRDDVEAVEIMQRIHVLRSQGGFNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HBN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190505 for 1810 contacts (-105.3/contact) +
2D Compatibility (PS) -24715 + (NN) -3808 + (LL) 8096
1D Compatibility (HY) 2000 + (ID) 2050
Total energy: -210982.0 ( -116.56 by residue)
QMean score : 0.139
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