Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGLNGTPFQPATLQLTGIPGIQTGLT-----WVALIFCILYMISIVGNLSIL----TLVFW--------EPALHQPMYYFLSML--ALNDLGVSFSTLPTVISTFCFNYNHVAFNACLVQMFFIHTFSFMESGIL-----LAMSLDRFVAICY---PLRYVTVLTHNRILAMGLGILTKSFTTLFPFPFVVKRLPFCKGNVLHHSYC---LHPDLMKVACGDIHVNNIY---GLLVIIFTYGMDSTFILLSYALILRAMLVIISQEQRLKALNTCMSHICAVLAFYVPIIAVSMIHRFWKSAPPVVHVMMSNVYLFVPPMLNPIIYSVK-TKEIRKGILKF----FHKSQA |
| 4RKS Chain:A ((21-337)) | TYRSIGSTAYP-TIGVVLLGGIANPVTRTPLHTSAGIAYSDSCGSIRSETRIYADEATHIYFNGTESTDDNRSVRRVLDRYSSVFEEAFGTKTVSYSSQNFGILSGSSDAGAASIGAAILGLKPDLDPHDVENDLRAVSESAGRSLFGGLTITWSDGFHAYTEKILDPEAF---------SGYSIVAFAFDYQRNP---SDVIHQNIVRSDLYPARKKHADEHAHMIKEYAKTNDIKGIFDLAQEDTE---EYHSILRGVGVNVIRENMQKLISYLKLIRKDYWNAYIVTGG-------------------SNVYVAVESENADRLFSIENTFGSKKKMLRIVGGAWHRRPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -330611 for 2267 contacts (-145.8/contact) +
2D Compatibility (PS) -29236 + (NN) 1656 + (LL) 3576
1D Compatibility (HY) -2800 + (ID) 2900
Total energy: -360315.0 ( -158.94 by residue)
QMean score : 0.149
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