Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MSISNITVYM--PSVLTLVGIPGL-----ESVQCWIGIPFCAIYLIAM------IGNSLLLSIIKSERSLHEPLYI--FLGMLGATDIALASSIMPKMLGIFWFNVPEIY------FDSCLLQMWFIHTLQGIESGILVAM--ALDRYVAICYPLRHANIFTHQLVIQIGT------------MVVLRAAILVAPCL-VLIKCRFQFYHTTVISHSYCEHMA-----IVKLAAANVQVNKIYGLFVAFTVAGFDL-----------TFITLSYIQIFITVFRL----PQKEA-RFKAFNTCIAHI-------------CVFLQFYL-LAFFSFFTHRFGSHISPYIHILFSS-IYLLVPPFLNP-LVYGAKTTQ--IRIHVVKMFCS------------------------------------------------------------------------------- |
| 4PXG Chain:A ((26-509)) | TKQAVHNRAKEAVGKSVLELNGGESIKSSVGDAFENWFGVALKATPFKKLKNGKYSSKERLVLNIINYEKVANENFETSSFLSKNNTIELAFYEYIKGTPSDNWIIKEAVLYEMHKNPIDYEIIKQDWEIINQYINEGKAHELSEGLTSYLAPCTKGANASSLRNQPYSDIKAKQRAFSLKSGYMTSILRKYVLGDEKIDSIVKDPFEIKEKSIEDIVFEKFQPYINWSIDKLCEHFSINKGEKGLNYRIASAILNLKGKTTKSKPFPEVEEFEKSSIVVKTVHFNKKNVNKESMSFGAFK--FEELANEEWEDSEGYPSAQWRNFLLETRFLFFVVKEDEDGVDIFKGIKFFSMPEEDINGPVKRMWDDTVKKLKEGVTLEAVPDKSTKDGWRIKNNFVDKSDDLICHVRPHTNNRDYRGGSNADKLPKKINWINRPDSDDYSDEWMTKQSFWINNDYIKKQVEDLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280736 for 1982 contacts (-141.6/contact) +
2D Compatibility (PS) -31727 + (NN) 1108 + (LL) 108
1D Compatibility (HY) -4800 + (ID) 2900
Total energy: -318947.0 ( -160.92 by residue)
QMean score : 0.035
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