Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGRGNSTEVTEFHLLGFGVQHEFQHVLFIVLLLIYVTSLIGNIGMILLIKTDSRLQTPMYFFPQHLAFVDICYTSAITPKMLQSFTEENNLITFRGCVIQFLVYATFATSDCYLLAIMAMDCYVAICKPLRYPMIMSQTVYIQL--VAGSYIIGSINASVHTGFTFSLSFCKSNKINHFFCDGLPILALSCSNIDINIILDVVFVGFDLMFTELVIIFSYIYIMVTILKMSSTAGRKKSFSTCASHLTAVTIFYGTLSYMYLQPQSNNSQENMKVASIFYGTVIPMLNPLIYSLRNKEGK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 4W8J Chain:A ((33-1178)) | YTPIDISLSLTQFLLSEFVPGAGFVLGLVDIIWGIFGPSQWDAFLVQIEQLINQRIEEFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLLAVQNYQVPLLSVYVQAANLHLSVLRDVSVFGQRWGFDAATINSRYNDLTRLIGNYTDYAVRWYNTGLERVWGPDSRDWVRYNQFRRELTLTVLDIVALFPNYDSRRYPIRTVSQLTREIYTNPVLENFDGSFRGSAQGIERSIRSPHLMDILNSITIYTDAHRGYYYWSGHQIMASPVGFSGPEFTFPLYGTMGNAAPQQRIVAQL-GQGVYRTLSSTLYRRPFNQQLSVLDG---TEFAYGTSSNLPSAVYRKSG-------------TVDSLDEIPPQNNNVPPRQGFSHRLSHVSMFRSG--FVSIIRAPMFSWIHRSAEVNNIIASDSITQIPAVKGNFLF---NGSVISGPGFT---------------GGDLVRLNSSNIQNRGYIEVP-IHFPSTSTRYRVRVRYA--SVTPIHLNVNWGNSSIFSNTV-------------------PATATSLDNLQSSDFGYFESANAFTGNIVGVRNFSGTAGVIIDRFEFIPVTATLEAEYNLERAQKAVNALFTSTNQLGLKTNVTDYHIDQVSNLVTYLSDEFSLDEKRELSEKVKHAKRLSDERNLLQDSNFKDINRERGWGGSTGITIQGGDDVFKENYVTLSGTFDESYPTYLYQKIDESKLKAFTRYQLRGYIEDSQDLEIYLIRYNAKHETVNVPGTGSSAHHSHHFSLDIDVGSTDLNEDLGVWVIFKIKTQDGHARLGNLEFLEEKPLVGEALARVKRAEKKWRDKREKLEWETNIVYKEAKESVDALFVNSQYDQLQADTNIAMIHAADKRVHSIREAYLPELSVIPGVNAAIFEELEGRIFTAFSLYDARNVIKNGDFNNGLSSWNVKGHVDVEEQNNQRSVLVVPEWEAEVSQEVRVSPGRGYILRVTAYKEGYGEGSVTIHEIENNTDELKFSNPVGYVTKELEYFPETDKVWIEIGETEGTFIVDSVELLLMEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147916 for 1530 contacts (-96.7/contact) +
2D Compatibility (PS) -25494 + (NN) -401 + (LL) 4588
1D Compatibility (HY) -4000 + (ID) 2650
Total energy: -175873.0 ( -114.95 by residue)
QMean score : 0.086
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