Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLCSFLQISRNMHQENQTTITEFILLGLSNQAEHQNLLFVLFLSMYVVTVVGNGLIIVAISLDIYLHTPMYLFLAYLSFADISSISNSVPKMLVNIQTNSQSISYESCITQMYFSIVFVVTDNLLLGTMAFDHFVAICHPLN--YTTFMRARFGT-LLTVISWFLSNIIALTHTLLLIQLLFCDHNTLPHFFCDLAPLLKLSCSDTMINELVLFIVGLSVIIFPFV------LIFFSYVCII--RAVLGVSSTQGKWKAFSTCGSHLTIA-------LLFYGTTVGVYFFPSSTHPEDTDKIGAVLF--TVVTPMMNP--------FIYSLRNKDMKG---------ALRKLINRKISSL----------------------- |
| 3THI Chain:A ((1-362)) | -----ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLP--FGSQDIDQAEDVLPFALQGAKRNGEVYGLPQILCT---NLLFYRKGDLKIGQV--DNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASMYLEALIDVTGQYTEYDLLP----PLDPL-----NDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGDYAEQVRFKPISSSAGQDIPLFYSDVVSVN--SKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQDYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275206 for 2446 contacts (-112.5/contact) +
2D Compatibility (PS) -31496 + (NN) -5554 + (LL) 2572
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -323484.0 ( -132.25 by residue)
QMean score : 0.189
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