Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MDQINHTNVKEFFFLELTRSRELEFFLFV-----VFFA--VYVATVLGNALI-----VVTITCESRLHTPMYFLLRNKSVLDIV--FSSIT-VPKFLVDLLSDRKTISYNDC-MAQIFFFHFAGG--ADIFFLSVMAY--DRYLAIAKPLHYVTMMRK-EVWVALV---VASWVSGGLHSIIQVI--------LMLPF-PFCGPNTLDAFYCYVLQ---VVKLACTDTF------------ALELFMISNNGLV---TLLWFLLLLGSYTVILVMLRSHSGEGRNKALSTCTSHMLVVTLHFV-PCVYIYCRPFMTLPMDTTI------------SINNTVITPMLNPI-------IYSLRNQEMKSAMQRLQRRLGPSESRKWG- |
| 4FS7 Chain:A ((2-394)) | YDFVIDEITYNFTKEHGTVEVSGLREFLNPLVVNIPPVVTYKDNKYDVVSIGYAAFQGCRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYALKSILLPL-MLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEF--PNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYG----CSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYLVEEIGKRSFRGCTSLSNINFPLSLRKIGANAFQGCINLKKVELPKRLEQYRYDFEDTTKFKWIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -312766 for 2083 contacts (-150.2/contact) +
2D Compatibility (PS) -30331 + (NN) 21125 + (LL) 168
1D Compatibility (HY) -19600 + (ID) 3450
Total energy: -344854.0 ( -165.56 by residue)
QMean score : 0.130
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