Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEENHTMKNEFILTGFTDHPELKTLLFVVFFAIYL-ITVVG-NISLVALIFTHRRLHTPMYIFLGNLALVDSCC-ACAIT-PKMLENFFSENKRI----SLYECAVQFYFLCTVETADCFLLAA-MAYDRYVAICNP---LQYH----IMMSKKLCIQMTTGAFIAGNLHSMIHVGLV---FRLVFCGSN-------HINHFYCDILPLYRLSCVDPYINELVLF------IFSGSVQVFTIGSVLISYLYILLTIFKM--KSKEGRAKAFSTCASHFL-------SVSLFYGSLFFMYVRPNLLEEG--DKDIPAAILFTIV--VPLLNPFIYS-LR-NREVISVLRKILMKK |
| 4LR4 Chain:A ((11-370)) | ---HFNTEDNDTDLTLLQSKIATEEVTCDFRVSNKYMWSASTMEYN-----FSDQKWTSNTEIFSTYAKTSEGFVMSGFLLNPKGQSNYNSALREGYLNDSAYDENQGHYYQCVVSDEDCNNITFMLESNVNVFIFDNDINLIYRSSDEAGVTSYFDRYYSTTKTIAGTSNKVISLGLIDGNYYIVFKVKDATATTGYHYGYYAGQPLPIAQTTTFSDLTHYTTIKWNRSSSSQSASTQTLTINCPSGSEDEYALTGVKFSDKSKAFANNTYASSIDYYYTPATASYSKKLAQTGGWWSDLVDNNPPSGSIDGNYATSVTVHWVSGISYVNASCTTMTQMTLDYLVPFGIIVG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290579 for 2152 contacts (-135.0/contact) +
2D Compatibility (PS) -31246 + (NN) 14261 + (LL) 1476
1D Compatibility (HY) -800 + (ID) 2700
Total energy: -309588.0 ( -143.86 by residue)
QMean score : 0.092
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