Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESPNRTTIQEFI---FSAFPYSWVKSVVCFVPLLFIYAFIVVGNLVIITVVQLNTHLHTPMYTFISALSFLEIWYTTATIPKMLSSLLSERSISFNGCLLQMYFFHSTGICEVCLLTVMAFDHYLAICSPLHYPSI-MTPKLCTQLTLSCCVCGFITPLPEI---AWISTLPFCGSNHLEHIFCDFLPVLRLACTDTRAIVMIQVVDVIHAVEIITAVML------IFMSYDGIVAVILRIHSAGGRRTAFSTCVSHFIVFSLFFGSVTLMYLRFSATYSLFWDIAIALAFAVLSPFFNPIIYSLRNKEIKEAIKKHIGQAKIFFSVRPGTSSKIF |
| 3PVT Chain:A ((1-304)) | MRSTQEERFEQRIAQETAIEPQDWMP-----------------DAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHG-----LYLYSAAETLGCAREDIYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQ--DAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYR-FGEIDWQEFNEVING------RGICNQERLDAKRKAWEEGTWVREAALAHAQK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276375 for 2233 contacts (-123.8/contact) +
2D Compatibility (PS) -28674 + (NN) 8656 + (LL) 3700
1D Compatibility (HY) -1600 + (ID) 2250
Total energy: -296543.0 ( -132.80 by residue)
QMean score : 0.105
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